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21.
Kowarsch, A. ; Fuchs, A.* ; Frishman, D. & Pagel, P.: Correlated mutations: A hallmark of phenotypic amino acid substitutions. PLoS Comput. Biol. 6:e1000923 (2010)
22.
Marr, C. ; Theis, F.J. ; Liebovitch, L.S.* & Hütt, M.-T.*: Patterns of subnet usage reveal distinct scales of regulation in the transcriptional regulatory network of Escherichia coli. PLoS Comput. Biol. 6, 31:e1000836 (2010)
23.
Klamt, S.* ; Haus, U.-U.* & Theis, F.J.: Hypergraphs and cellular networks. PLoS Comput. Biol. 5:e1000385 (2009)
24.
Wittmann, D.M. et al.: Spatial analysis of expression patterns predicts genetic interactions at the mid-hindbrain boundary. PLoS Comput. Biol. 5:e1000569 (2009)
25.
Tetko, I.V. et al.: Spatiotemporal expression control correlates with intragenic scaffold matrix attachment regions (S/MARs) in Arabidopsis thaliana. PLoS Comput. Biol. 2, 136-145:e21 (2006)
26.
Wong, P. & Frishman, D.: Fold designability, distribution and disease. PLoS Comput. Biol. 2, 392-402:e40 (2006)