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Papadimitriou, K.* ; Baharidis, P.K.* ; Georgoulis, A.* ; Engel, M. ; Louka, M.* ; Karamolegkou, G.* ; Tsoka, A.* ; Blom, J.* ; Pot, B.* ; Malecki, P.* ; Rypniewski, W.* ; Huber, H.* ; Schloter, M. ; Vorgias, C.*

Analysis of the complete genome sequence of the archaeon Pyrococcus chitonophagus DSM 10152 (formerly Thermococcus chitonophagus).

Extremophiles 20, 351-361 (2016)
DOI
Open Access Green as soon as Postprint is submitted to ZB.
Here we analyze the first complete genome sequence of Pyrococcus chitonophagus. The archaeon was previously suggested to belong to the Thermococcus rather than the Pyrococcus genus. Whole genome phylogeny as well as whole proteome comparisons using all available complete genomes in Thermococcales clearly showed that the species belongs to the Pyrococcus genus. P. chitonophagus was originally isolated from a hydrothermal vent site and it has been described to effectively degrade chitin debris, and therefore is considered to play a major role in the sea water ecology and metabolic activity of microbial consortia within hot sea water ecosystems. Indeed, an obvious feature of the P. chitonophagus genome is that it carries proteins showing complementary activities for chitin degradation, i.e. endo- and exo-chitinase, diacetylchitobiose deacetylase and exo-β-D glucosaminidase activities. This finding supports the hypothesis that compared to other Thermococcales species P. chitonophagus is adapted to chitin degradation.
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Publication type Article: Journal article
Document type Scientific Article
Keywords Chitinolytic Activity ; Genome Analysis ; Hyperthermophilic Archeon ; Pyrococcus Chitonophagus; Hyperthermophilic Archaeon; Kodakaraensis Kod1; Ferredoxin Oxidoreductase; Hydrogen-production; Elemental Sulfur; Sp-nov; Furiosus; Chitinase; Metabolism; Kodakarensis
ISSN (print) / ISBN 1431-0651
e-ISSN 1433-4909
Journal Extremophiles
Quellenangaben Volume: 20, Issue: 3, Pages: 351-361 Article Number: , Supplement: ,
Publisher Springer
Publishing Place Tokyo
Reviewing status Peer reviewed