Abdelaziz, A. ; Sushko, I. ; Teetz, W. ; Körner, R. ; Novotarskyi, S. ; Tetko, I.V.
QSAR modeling for in vitro assays: Linking ToxCast™ database to the integrated modeling framework “OCHEM”.
Poster: (2012)
Anosova, I.
NMR investigation of protein-RNA interactions involved in ribosomal gene silencing.
München, Technische Universität, Fakultät für Chemie, Diss., 2012, 189 S.
Asami, S.* ; Reif, B.
Assignment strategies for aliphatic protons in the solid-state in randomly protonated proteins.
J. Biomol. NMR 52, 31-39 (2012)
Asami, S. ; Szekely, K.* ; Schanda, P.* ; Meier, B.H.* ; Reif, B.
Optimal degree of protonation for 1H detection of aliphatic sites in randomly deuterated proteins as a function of the MAS frequency.
J. Biomol. NMR 54, 155-168 (2012)
Aumiller, V.* ; Graebsch, A. ; Kremmer, E. ; Niessing, D. ; Forstemann, K.*
Drosophila Pur-α binds to trinucleotide-repeat containing cellular RNAs and translocates to the early oocyte.
RNA Biol. 9, 633-643 (2012)
Brandmaier, S. ; Sahlin, U.* ; Tetko, I.V. ; Öberg, T.*
PLS-optimal: A stepwise D-optimal design based on latent variables.
J. Chem. Inf. Model. 52, 975-983 (2012)
Brandmaier, S. ; Tetko, I.V. ; Öberg, T.*
An evaluation of experimental design in QSAR modelling utilizing the k-medoid clustering.
J. Chemometr. 26, 509-517 (2012)
Dormann, D.* ; Madl, T. ; Valori, C.F.* ; Bentmann, E.* ; Tahirovic, S.* ; Abou-Ajram, C.* ; Kremmer, E. ; Ansorge, O.* ; Mackenzie, I.R.* ; Neumann, M.* ; Haass, C.*
Arginine methylation next to the PY-NLS modulates transportin binding and nuclear import of FUS.
EMBO J. 31, 4258-4275 (2012)
Duszczyk, M.M. ; Sattler, M.
1H, 13C, 15N and 31P chemical shift assignments of a human Xist RNA A-repeat tetraloop hairpin essential for X-chromosome inactivation.
Biomol. NMR Assign. 6, 75-77 (2012)
Hennig, J. ; de Vries, S.J.* ; Hennig, K.D.* ; Randles, L.* ; Walters, K.J.* ; Sunnerhagen, M.* ; Bonvin, A.M.*
MTMDAT-HADDOCK: High-throughput, protein complex structure modeling based on limited proteolysis and mass spectrometry.
BMC Struct. Biol. 12:29 (2012)
Heym, R.G. ; Niessing, D.
Principles of mRNA transport in yeast.
Cell. Mol. Life Sci. 69, 1843-1853 (2012)
Heym, R.G.
Characterization of a cytoplasmic mRNA-transport complex from yeast.
München, Ludwig-Maximilians-Universität, Fakultät für Chemie und Pharmazie, Diss., 2012, 132 S.
Holdermann, I.* ; Meyer, N.H. ; Round, A.* ; Wild, K.* ; Sattler, M. ; Sinning, I.*
Chromodomains read the arginine code of post-translational targeting.
Nat. Struct. Mol. Biol. 19, 260-263 (2012)
Hüls, D.
Structural and functional studies on mitotic spindle orientation in Saccharomyces cerevisiae.  
München, Ludwig-Maximilians-Universität München, Fakultät für Chemie und Pharmazie, Diss., 2012, 102 S.
Hüls, D. ; Storchova, Z.* ; Niessing, D.
Post-translational modifications regulate assembly of early spindle orientation complex in yeast.
J. Biol. Chem. 287, 16238-16245 (2012)
Hüls, D. ; Niessing, D.
Purification, crystallization and preliminary crystallographic analysis of Kar9p from Saccharomyces cerevisiae.
Acta Crystallogr. F-Struct. Biol. Cryst. Commun. 68, 1251-1254 (2012)
Jacso, T. ; Franks, W.T.* ; Rose, H.* ; Fink, U.* ; Broecker, J.* ; Keller, S.* ; Oschkinat, H.* ; Reif, B.
Characterization of membrane proteins in isolated native cellular membranes by dynamic nuclear polarization solid-state NMR spectroscopy without purification and reconstitution.
Angew. Chem.-Int. Edit. 51, 432-435 (2012)
Jacso, T. ; Schneider, E.* ; Rupp, B.* ; Reif, B.
Substrate transport activation is mediated through second periplasmic loop of transmembrane protein MalF in maltose transport complex of Escherichia coli.
J. Biol. Chem. 287, 17040-17049 (2012)
Jansen, R.-P.* ; Niessing, D.
Assembly of mRNA-protein complexes for directional mRNA transport in eukaryotes - an overview.
Curr. Protein Pept. Sci. 13, 284-293 (2012)
Kaden, D.* ; Munter, L.M.* ; Reif, B. ; Multhaup, G.*
The amyloid precursor protein and its homologues: Structural and functional aspects of native and pathogenic oligomerization.
Eur. J. Cell Biol. 91, 234-239 (2012)
Kellogg, E.H.* ; Lange, O.F. ; Baker, D.*
Evaluation and optimization of discrete state models of protein folding.
J. Phys. Chem. B 116, 11405-11413 (2012)
Körner, R. ; Sushko, I.* ; Novotarskyi, S. ; Tetko, I.V.
In silico pKa prediction.
Poster: 7th German Conference on Cheminformatics, 6 - 8 November 2011, Goslar. (2012)
Lange, O.F. ; Baker, D.*
Resolution-adapted recombination of structural features significantly improves sampling in restraint-guided structure calculation.
Proteins 80, 884-895 (2012)
Lange, O.F. ; Rossi, P.* ; Sgourakis, N.G.* ; Song, Y.F.* ; Lee, H.-W.* ; Aramini, J.M.* ; Ertekin, A.* ; Xiao, R.* ; Acton, T.B.* ; Montelione, G.T.* ; Baker, D.*
Determination of solution structures of proteins up to 40 kDa using CS-Rosetta with sparse NMR data from deuterated samples.
Proc. Natl. Acad. Sci. U.S.A. 109, 10873-10878 (2012)
Lange, O.F.
Protein structure determination using sparse NMR data.
RSC Biomol. Sci. 1, 84-110 (2012)
Liokatis, S.* ; Edlich, C.* ; Soupsana, K.* ; Giannios, I.* ; Panagiotidou, P.* ; Tripsianes, K. ; Sattler, M. ; Georgatos, S.D.* ; Politou, A.S.*
Solution structure and molecular interactions of lamin B receptor Tudor domain.
J. Biol. Chem. 287, 1032-1042 (2012)
Lopez del Amo, J.M. ; Schmidt, M.* ; Fink, U.* ; Dasari, M. ; Fändrich, M.* ; Reif, B.
An asymmetric dimer as the basic subunit in Alzheimer's disease amyloid β fibrils.
Angew. Chem.-Int. Edit. 51, 6136-6139 (2012)
Lopez del Amo, J.M. ; Fink, U.* ; Dasari, M. ; Grelle, G.* ; Wanker, E.E.* ; Bieschke, J.* ; Reif, B.
Structural properties of EGCG-induced, nontoxic Alzheimer's disease Aβ oligomers.
J. Mol. Biol. 421, 517-524 (2012)
Mackereth, C.D.* ; Sattler, M.
Dynamics in multi-domain protein recognition of RNA.
Curr. Opin. Struct. Biol. 22, 287-296 (2012)
Mainz, A. ; Bardiaux, B.* ; Kuppler, F.* ; Multhaup, G.* ; Felli, I.C.* ; Pierattelli, R.* ; Reif, B.
Structural and mechanistic implications of metal binding in the small heat-shock protein αB-crystallin.
J. Biol. Chem. 287, 1128-1138 (2012)
Mathioudakis, N.* ; Palencia, A.* ; Kadlec, J.* ; Round, A.* ; Tripsianes, K. ; Sattler, M. ; Pillai, R.S.* ; Cusack, S.*
The multiple Tudor domain-containing protein TDRD1 is a molecular scaffold for mouse piwi proteins and piRNA biogenesis factors.
RNA 18, 2056-2072 (2012)
Mayer, C.E. ; Geerlof, A. ; Schepers, A.
Efficient expression and purification of tag-free Epstein-Barr virus EBNA1 protein in Escherichia coli by auto-induction.
Protein Expr. Purif. 86, 7-11 (2012)
Reif, B.
Ultra-high resolution in MAS solid-state NMR of perdeuterated proteins: Implications for structure and dynamics.
J. Magn. Reson. 216, 1-12 (2012)
Reif, B.
Deuterated peptides and proteins: Structure and dynamics studies by MAS solid-state NMR.
Methods Mol. Biol. 831, 279-301 (2012)
Schütz, U.E.
Structural and functional studies of the farnesylated peroxisomal membrane protein receptor PEX19.
München, Technische Universität, Fakultät für Chemie, Diss., 2012, 132 S.
Sushko, I.* ; Salmina, E.* ; Potemkin, V.A.* ; Poda, G.* ; Tetko, I.V.
ToxAlerts: A web server of structural alerts for toxic chemicals and compounds with potential adverse reactions.
J. Chem. Inf. Model. 52, 2310-2316 (2012)
Tavanez, J.P.* ; Madl, T. ; Kooshapur, H. ; Sattler, M. ; Valcárcel, J.*
hnRNP A1 proofreads 3' splice site recognition by U2AF.
Mol. Cell 45, 314-329 (2012)
Tetko, I.V.
The perspectives of computational chemistry modeling.
J. Comput.-Aided Mol. Des. 26, 135-136 (2012)
Velvarska, H.
Structural and functional studies on myosin type V: Dependent transport in vertebrates.
München, Ludwig-Maximilians-Universität, Fakultät für Chemie und Pharmazie, Diss., 2012, 102 S.
Wang-Sattler, R. ; Yu, Z. ; Herder, C.* ; Messias, A.C. ; Floegel, A.* ; He, Y.* ; Heim, K. ; Campillos, M.J. ; Holzapfel, C. ; Thorand, B. ; Grallert, H. ; Xu, T. ; Bader, E. ; Huth, C. ; Mittelstraß, K. ; Döring, A. ; Meisinger, C. ; Gieger, C. ; Prehn, C. ; Römisch-Margl, W. ; Carstensen, M.* ; Xie, L.* ; Yamanaka-Okumura, H.* ; Xing, G.* ; Ceglarek, U.* ; Thiery, J.* ; Giani, G.* ; Lickert, H. ; Lin, X.* ; Li, Y.* ; Boeing, H.* ; Joost, H.-G.* ; Hrabě de Angelis, M. ; Rathmann, W.* ; Suhre, K. ; Prokisch, H. ; Peters, A. ; Meitinger, T. ; Roden, M.* ; Wichmann, H.-E. ; Pischon, T.* ; Adamski, J. ; Illig, T.
Novel biomarkers for pre-diabetes identified by metabolomics.
Mol. Syst. Biol. 8:615 (2012)